Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
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Gene: E130006D01Rik ENSMUSG00000085271

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Description

RIKEN cDNA E130006D01 gene [Source:MGI Symbol;Acc:MGI:2685527]

Gene Synonyms

Gm16018, Hrtlincr5, LOC269683

Location

Chromosome 5: 111,881,540-111,909,638 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000244143.1	E130006D01Rik-205	1955	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMUST00000244157.1	E130006D01Rik-206	1734	No protein	-	lncRNA		The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000129065.9	E130006D01Rik-201	1403	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245053.1	E130006D01Rik-208	1152	No protein	-	lncRNA		-
ENSMUST00000243553.1	E130006D01Rik-204	1137	No protein	-	lncRNA		-
ENSMUST00000244539.1	E130006D01Rik-207	997	No protein	-	lncRNA		-
ENSMUST00000137398.9	E130006D01Rik-203	961	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000247100.1	E130006D01Rik-209	743	No protein	-	lncRNA		-
ENSMUST00000129146.3	E130006D01Rik-202	645	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

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Summary

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