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Gene: 5830444B04Rik ENSMUSG00000084803

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Description

RIKEN cDNA 5830444B04 gene [Source:MGI Symbol;Acc:MGI:3603170]

Location

Chromosome 4: 155,483,207-155,519,397 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000315331.1	5830444B04Rik-205	950	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000166921.9	5830444B04Rik-204	2925	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000145520.3	5830444B04Rik-201	2757	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000152780.2	5830444B04Rik-202	1446	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000315335.1	5830444B04Rik-209	950	No protein	-	lncRNA		-
ENSMUST00000315336.1	5830444B04Rik-210	923	No protein	-	lncRNA		-
ENSMUST00000315332.1	5830444B04Rik-206	835	No protein	-	lncRNA		-
ENSMUST00000315337.1	5830444B04Rik-211	806	No protein	-	lncRNA		-
ENSMUST00000315334.1	5830444B04Rik-208	789	No protein	-	lncRNA		-
ENSMUST00000315333.1	5830444B04Rik-207	784	No protein	-	lncRNA		-
ENSMUST00000315338.1	5830444B04Rik-212	588	No protein	-	lncRNA		-
ENSMUST00000166858.2	5830444B04Rik-203	388	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000315339.1	5830444B04Rik-213	256	No protein	-	lncRNA		-
ENSMUST00000315340.1	5830444B04Rik-214	254	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

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Summary

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