Gene: Pde11a ENSMUSG00000075270

Description

phosphodiesterase 11A [Source:MGI Symbol;Acc:MGI:3036251]

Gene Synonyms

6330414F14Rik, A630086N24Rik

Location

Chromosome 2: 75,819,485-76,169,118 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 3 transcripts (splice variants), 281 orthologues, 20 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000099992.10	Pde11a-201	4189	933aa	ENSMUSP00000097572.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38152	P0C1Q2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000124825.2	Pde11a-202	2209	72aa	ENSMUSP00000117451.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F7AAG1	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000144892.2	Pde11a-203	1496	444aa	ENSMUSP00000115662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6SXR7	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Gene: Pde11a ENSMUSG00000075270

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Pde11a ENSMUSG00000075270

Summary

About Us

Get help

Our sister sites

Follow us