Gene: 1110002L01Rik ENSMUSG00000071456

Description

RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]

Location

Chromosome 12: 3,453,878-3,477,717 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 34 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000095903.9	1110002L01Rik-201	4152	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000168012.3	1110002L01Rik-202	3569	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000180149.4	1110002L01Rik-204	2792	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000343562.1	1110002L01Rik-218	1875	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000179637.5	1110002L01Rik-203	1699	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000244262.2	1110002L01Rik-209	1682	No protein	-	lncRNA	-
ENSMUST00000343556.1	1110002L01Rik-212	1501	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244207.2	1110002L01Rik-208	1392	No protein	-	lncRNA	-
ENSMUST00000343558.1	1110002L01Rik-214	1388	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240846.2	1110002L01Rik-205	1384	No protein	-	lncRNA	-
ENSMUST00000343555.1	1110002L01Rik-211	1379	No protein	-	lncRNA	-
ENSMUST00000343557.1	1110002L01Rik-213	1376	No protein	-	lncRNA	-
ENSMUST00000343554.1	1110002L01Rik-210	1355	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343560.1	1110002L01Rik-216	1130	No protein	-	lncRNA	-
ENSMUST00000343566.1	1110002L01Rik-222	1122	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343559.1	1110002L01Rik-215	1106	No protein	-	lncRNA	-
ENSMUST00000242357.1	1110002L01Rik-206	1099	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343563.1	1110002L01Rik-219	1054	No protein	-	lncRNA	-
ENSMUST00000343577.1	1110002L01Rik-233	976	No protein	-	lncRNA	-
ENSMUST00000343561.1	1110002L01Rik-217	927	No protein	-	lncRNA	-
ENSMUST00000343568.1	1110002L01Rik-224	913	No protein	-	lncRNA	-
ENSMUST00000343565.1	1110002L01Rik-221	885	No protein	-	lncRNA	-
ENSMUST00000343576.1	1110002L01Rik-232	874	No protein	-	lncRNA	-
ENSMUST00000343567.1	1110002L01Rik-223	856	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343572.1	1110002L01Rik-228	818	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343574.1	1110002L01Rik-230	772	No protein	-	lncRNA	-
ENSMUST00000343570.1	1110002L01Rik-226	760	No protein	-	lncRNA	-
ENSMUST00000343571.1	1110002L01Rik-227	746	No protein	-	lncRNA	-
ENSMUST00000343569.1	1110002L01Rik-225	733	No protein	-	lncRNA	-
ENSMUST00000243792.2	1110002L01Rik-207	730	No protein	-	lncRNA	-
ENSMUST00000343564.1	1110002L01Rik-220	706	No protein	-	lncRNA	-
ENSMUST00000343575.1	1110002L01Rik-231	587	No protein	-	lncRNA	-
ENSMUST00000343578.1	1110002L01Rik-234	330	No protein	-	lncRNA	-
ENSMUST00000343573.1	1110002L01Rik-229	282	No protein	-	lncRNA	-

Gene: 1110002L01Rik ENSMUSG00000071456

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Gene: 1110002L01Rik ENSMUSG00000071456

Summary

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