Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Vmn1r196 ENSMUSG00000069295

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Description

vomeronasal 1 receptor 196 [Source:MGI Symbol;Acc:MGI:4438447]

Gene Synonyms

V1rh19

Location

Chromosome 13: 22,474,090-22,482,530 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 5 transcripts (splice variants), 173 orthologues and 237 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000228382.2	Vmn1r196-204	6525	301aa	ENSMUSP00000154358.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49219	Q5SVD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000228557.2	Vmn1r196-205	5790	301aa	ENSMUSP00000154145.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49219	Q5SVD5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000226245.2	Vmn1r196-202	5312	224aa	ENSMUSP00000154048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BQ58	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000227516.2	Vmn1r196-203	5122	116aa	ENSMUSP00000154355.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BQY1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000091735.2	Vmn1r196-201	906	301aa	ENSMUSP00000089329.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49219	Q5SVD5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

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Summary

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