Gene: Asb18 ENSMUSG00000067081

Description

ankyrin repeat and SOCS box-containing 18 [Source:MGI Symbol;Acc:MGI:2655109]

Location

Chromosome 1: 89,877,942-89,942,388 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 5 transcripts (splice variants), 108 orthologues, 7 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000086882.8	Asb18-201	3862	467aa	ENSMUSP00000084095.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15151	Q8VHA6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238685.2	Asb18-205	3775	438aa	ENSMUSP00000158643.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BD84	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000097656.10	Asb18-202	788	203aa	ENSMUSP00000095261.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BX71	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000154228.8	Asb18-204	773	159aa	ENSMUSP00000117767.2	Nonsense mediated decay		Q8VHA6-2	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000151330.2	Asb18-203	610	89aa	ENSMUSP00000117836.2	Nonsense mediated decay		D6REF8	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Gene: Asb18 ENSMUSG00000067081

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Gene: Asb18 ENSMUSG00000067081

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