Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gda ENSMUSG00000058624

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Description

guanine deaminase [Source:MGI Symbol;Acc:MGI:95678]

Location

Chromosome 19: 21,368,671-21,450,809 reverse strand.

GRCm39:CM001012.3

About this gene

This gene has 11 transcripts (splice variants), 205 orthologues and is associated with 24 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000087600.10	Gda-201	5428	454aa	ENSMUSP00000084882.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29698	Q548F2 Q9R111	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237823.3	Gda-204	5223	429aa	ENSMUSP00000157532.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B982	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000121725.9	Gda-202	5181	380aa	ENSMUSP00000112758.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YU09	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000498796.1	Gda-205	5185	74aa	ENSMUSP00000277159.1	Nonsense mediated decay		-	-
ENSMUST00000498802.1	Gda-211	4737	43aa	ENSMUSP00000277165.1	Nonsense mediated decay		-	-
ENSMUST00000498797.1	Gda-206	4378	43aa	ENSMUSP00000277160.1	Nonsense mediated decay		-	-
ENSMUST00000498798.1	Gda-207	4188	43aa	ENSMUSP00000277161.1	Nonsense mediated decay		-	-
ENSMUST00000498799.1	Gda-208	3611	241aa	ENSMUSP00000277162.1	Nonsense mediated decay		-	-
ENSMUST00000498801.1	Gda-210	3559	43aa	ENSMUSP00000277164.1	Nonsense mediated decay		-	-
ENSMUST00000498800.1	Gda-209	3516	41aa	ENSMUSP00000277163.1	Nonsense mediated decay		-	-
ENSMUST00000136258.2	Gda-203	1353	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Summary

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