Gene: Nfam1 ENSMUSG00000058099

Description

Nfat activating molecule with ITAM motif 1 [Source:MGI Symbol;Acc:MGI:1921289]

Gene Synonyms

4921501M20Rik, Nfam1

Location

Chromosome 15: 82,877,174-82,917,507 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 5 transcripts (splice variants), 98 orthologues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000231165.2	Nfam1-204	7634	264aa	ENSMUSP00000154945.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS70652	Q8R4V1-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSMUST00000109503.10	Nfam1-203	2834	224aa	ENSMUSP00000105129.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27694	Q8R4V1-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000023076.6	Nfam1-201	2811	213aa	ENSMUSP00000023076.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS70651	Q8R4V1-3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000100377.12	Nfam1-202	2694	104aa	ENSMUSP00000097946.6	Nonsense mediated decay		A0A2U3TZ64	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231204.2	Nfam1-205	1732	61aa	ENSMUSP00000155610.2	Nonsense mediated decay		A0A2R8VI11	-

Gene: Nfam1 ENSMUSG00000058099

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Gene: Nfam1 ENSMUSG00000058099

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