Gene: Pom121 ENSMUSG00000053293

Description

nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]

Gene Synonyms

2610027A18Rik

Location

Chromosome 5: 135,404,995-135,423,412 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 6 transcripts (splice variants), 210 orthologues, 4 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000111171.7	Pom121-201	5592	1200aa	ENSMUSP00000106801.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51662	Q3U425 Q8K3Z9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000567504.1	Pom121-204	5511	1173aa	ENSMUSP00000345867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000479049.1	Pom121-202	5740	433aa	ENSMUSP00000257412.1	Nonsense mediated decay		-	-
ENSMUST00000479050.1	Pom121-203	5657	450aa	ENSMUSP00000257413.1	Nonsense mediated decay		-	-
ENSMUST00000567505.1	Pom121-205	5577	507aa	ENSMUSP00000345868.1	Nonsense mediated decay		-	-
ENSMUST00000567506.1	Pom121-206	5569	443aa	ENSMUSP00000345869.1	Nonsense mediated decay		-	-

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Gene: Pom121 ENSMUSG00000053293

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Gene: Pom121 ENSMUSG00000053293

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