Gene: Map1b ENSMUSG00000052727

Description

microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]

Gene Synonyms

LC1, MAP5, Mtap-5, Mtap1b, Mtap5

Location

Chromosome 13: 99,557,954-99,653,048 reverse strand.

GRCm39:CM001006.3

About this gene

This gene has 6 transcripts (splice variants), 214 orthologues, 2 paralogues and is associated with 47 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000064762.6	Map1b-201	11808	2464aa	ENSMUSP00000068374.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26723	P14873	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000223725.2	Map1b-203	2669	61aa	ENSMUSP00000153390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YDV1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000224702.2	Map1b-206	2150	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000223693.2	Map1b-202	1759	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000224605.2	Map1b-205	366	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000223820.2	Map1b-204	1364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Map1b ENSMUSG00000052727

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Gene: Map1b ENSMUSG00000052727

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