Gene: Fam171b ENSMUSG00000048388

Description

family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]

Gene Synonyms

D430039N05Rik

Location

Chromosome 2: 83,642,825-83,713,884 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 24 transcripts (splice variants), 251 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000051454.5	Fam171b-201	5762	821aa	ENSMUSP00000062702.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16182	Q14CH0-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000470005.1	Fam171b-204	5750	817aa	ENSMUSP00000248368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470013.1	Fam171b-212	5669	790aa	ENSMUSP00000248376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470018.1	Fam171b-217	5606	769aa	ENSMUSP00000248381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470011.1	Fam171b-210	5591	764aa	ENSMUSP00000248374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470010.1	Fam171b-209	5513	738aa	ENSMUSP00000248373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470024.1	Fam171b-223	5435	712aa	ENSMUSP00000248387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470006.1	Fam171b-205	5342	681aa	ENSMUSP00000248369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470022.1	Fam171b-221	5108	603aa	ENSMUSP00000248385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470025.1	Fam171b-224	5101	184aa	ENSMUSP00000248388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000470015.1	Fam171b-214	6071	87aa	ENSMUSP00000248378.1	Nonsense mediated decay		-	-
ENSMUST00000470004.1	Fam171b-203	6005	105aa	ENSMUSP00000248367.1	Nonsense mediated decay		-	-
ENSMUST00000470014.1	Fam171b-213	5970	147aa	ENSMUSP00000248377.1	Nonsense mediated decay		-	-
ENSMUST00000470007.1	Fam171b-206	5953	87aa	ENSMUSP00000248370.1	Nonsense mediated decay		-	-
ENSMUST00000470012.1	Fam171b-211	5767	87aa	ENSMUSP00000248375.1	Nonsense mediated decay		-	-
ENSMUST00000470019.1	Fam171b-218	5761	236aa	ENSMUSP00000248382.1	Nonsense mediated decay		-	-
ENSMUST00000470009.1	Fam171b-208	5749	207aa	ENSMUSP00000248372.1	Nonsense mediated decay		-	-
ENSMUST00000470016.1	Fam171b-215	5702	301aa	ENSMUSP00000248379.1	Nonsense mediated decay		-	-
ENSMUST00000470017.1	Fam171b-216	5668	236aa	ENSMUSP00000248380.1	Nonsense mediated decay		-	-
ENSMUST00000470008.1	Fam171b-207	5553	279aa	ENSMUSP00000248371.1	Nonsense mediated decay		-	-
ENSMUST00000470023.1	Fam171b-222	3815	80aa	ENSMUSP00000248386.1	Nonsense mediated decay		-	-
ENSMUST00000470021.1	Fam171b-220	3748	99aa	ENSMUSP00000248384.1	Nonsense mediated decay		-	-
ENSMUST00000470020.1	Fam171b-219	3738	231aa	ENSMUSP00000248383.1	Nonsense mediated decay		-	-
ENSMUST00000148184.2	Fam171b-202	353	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

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Gene: Fam171b ENSMUSG00000048388

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Gene: Fam171b ENSMUSG00000048388

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