Gene: Vwa1 ENSMUSG00000042116

Description

von Willebrand factor A domain containing 1 [Source:MGI Symbol;Acc:MGI:2179729]

Gene Synonyms

4932416A11Rik, WARP

Location

Chromosome 4: 155,852,606-155,859,155 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 7 transcripts (splice variants), 237 orthologues, 13 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000042196.4	Vwa1-201	3623	415aa	ENSMUSP00000040405.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19039	Q8R2Z5-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000466700.1	Vwa1-203	3607	317aa	ENSMUSP00000245063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000466702.1	Vwa1-204	3065	229aa	ENSMUSP00000245065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000466706.1	Vwa1-206	2560	215aa	ENSMUSP00000245069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000466704.1	Vwa1-205	2474	389aa	ENSMUSP00000245067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000466698.1	Vwa1-202	3614	215aa	ENSMUSP00000245061.1	Nonsense mediated decay		-	-
ENSMUST00000466708.1	Vwa1-207	2451	67aa	ENSMUSP00000245071.1	Nonsense mediated decay		-	-

Upcoming Ensembl Platform Transition

Gene: Vwa1 ENSMUSG00000042116

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Gene: Vwa1 ENSMUSG00000042116

Summary

About Us

Get help

Our sister sites

Follow us