Gene: Otud3 ENSMUSG00000041161

Description

OTU domain containing 3 [Source:MGI Symbol;Acc:MGI:1920412]

Gene Synonyms

3110030K17Rik

Location

Chromosome 4: 138,620,953-138,641,294 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 11 transcripts (splice variants), 208 orthologues, 5 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000097830.5	Otud3-201	1708	396aa	ENSMUSP00000095441.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51337	B1AZ99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000505216.1	Otud3-204	1849	443aa	ENSMUSP00000283579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000505218.1	Otud3-206	1834	438aa	ENSMUSP00000283581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000505214.1	Otud3-202	3318	141aa	ENSMUSP00000283577.1	Nonsense mediated decay		-	-
ENSMUST00000505219.1	Otud3-207	2335	104aa	ENSMUSP00000283582.1	Nonsense mediated decay		-	-
ENSMUST00000505222.1	Otud3-210	2219	141aa	ENSMUSP00000283585.1	Nonsense mediated decay		-	-
ENSMUST00000505215.1	Otud3-203	2066	104aa	ENSMUSP00000283578.1	Nonsense mediated decay		-	-
ENSMUST00000505221.1	Otud3-209	1808	104aa	ENSMUSP00000283584.1	Nonsense mediated decay		-	-
ENSMUST00000505217.1	Otud3-205	1682	104aa	ENSMUSP00000283580.1	Nonsense mediated decay		-	-
ENSMUST00000505223.1	Otud3-211	1473	88aa	ENSMUSP00000283586.1	Nonsense mediated decay		-	-
ENSMUST00000505220.1	Otud3-208	1450	132aa	ENSMUSP00000283583.1	Nonsense mediated decay		-	-

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Gene: Otud3 ENSMUSG00000041161

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Gene: Otud3 ENSMUSG00000041161

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