Gene: Bmp6 ENSMUSG00000039004

Description

bone morphogenetic protein 6 [Source:MGI Symbol;Acc:MGI:88182]

Gene Synonyms

D13Wsu115e, Vgr1

Location

Chromosome 13: 38,529,065-38,684,280 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 6 transcripts (splice variants), 202 orthologues, 31 paralogues and is associated with 42 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000171970.3	Bmp6-201	3593	510aa	ENSMUSP00000126999.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26462	P20722	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000223628.2	Bmp6-202	594	71aa	ENSMUSP00000152947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCE8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000475653.1	Bmp6-204	3525	374aa	ENSMUSP00000254016.1	Nonsense mediated decay		-	-
ENSMUST00000567968.1	Bmp6-206	3481	284aa	ENSMUSP00000346331.1	Nonsense mediated decay		-	-
ENSMUST00000475654.1	Bmp6-205	3413	251aa	ENSMUSP00000254017.1	Nonsense mediated decay		-	-
ENSMUST00000224452.2	Bmp6-203	671	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

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Gene: Bmp6 ENSMUSG00000039004

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Gene: Bmp6 ENSMUSG00000039004

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