Gene: Smug1 ENSMUSG00000036061

Description

single-strand selective monofunctional uracil DNA glycosylase [Source:MGI Symbol;Acc:MGI:1918976]

Gene Synonyms

1200013B09Rik, A930006H09Rik

Location

Chromosome 15: 103,061,717-103,075,519 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 6 transcripts (splice variants), 197 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000229371.2	Smug1-202	3882	279aa	ENSMUSP00000155594.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27898	Q6P5C5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000229377.2	Smug1-203	3601	279aa	ENSMUSP00000155700.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27898	Q6P5C5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000064067.9	Smug1-201	3281	279aa	ENSMUSP00000065835.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27898	Q6P5C5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000231198.2	Smug1-206	491	144aa	ENSMUSP00000155293.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHQ1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000230529.2	Smug1-205	751	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000229429.2	Smug1-204	3752	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Smug1 ENSMUSG00000036061

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Smug1 ENSMUSG00000036061

Summary

About Us

Get help

Our sister sites

Follow us