Gene: Pank1 ENSMUSG00000033610

Description

pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]

Gene Synonyms

4632412I06Rik, 5430426F23Rik, Pank1, Pank1a, Pank1b

Location

Chromosome 19: 34,784,340-34,856,855 reverse strand.

GRCm39:CM001012.3

About this gene

This gene has 4 transcripts (splice variants), 230 orthologues, 3 paralogues and is associated with 20 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000036584.13	Pank1-201	7414	548aa	ENSMUSP00000043562.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50424	Q8K4K6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000112460.3	Pank1-202	2760	373aa	ENSMUSP00000108079.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37966	Q8K4K6-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238065.2	Pank1-204	2342	251aa	ENSMUSP00000157555.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9A0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000237577.2	Pank1-203	1138	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Pank1 ENSMUSG00000033610

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Gene: Pank1 ENSMUSG00000033610

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