Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Rac2 ENSMUSG00000033220

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Description

Rac family small GTPase 2 [Source:MGI Symbol;Acc:MGI:97846]

Location

Chromosome 15: 78,443,367-78,457,429 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 6 transcripts (splice variants), 233 orthologues, 23 paralogues and is associated with 44 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000043214.9	Rac2-201	3484	192aa	ENSMUSP00000036384.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27619	Q05144	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000456463.1	Rac2-205	1398	192aa	ENSMUSP00000234826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27619	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000230952.2	Rac2-203	254	80aa	ENSMUSP00000155090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHH0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000456462.1	Rac2-204	3017	36aa	ENSMUSP00000234825.1	Nonsense mediated decay		-	-
ENSMUST00000456464.1	Rac2-206	1334	41aa	ENSMUSP00000234827.1	Nonsense mediated decay		-	-
ENSMUST00000229394.2	Rac2-202	459	36aa	ENSMUSP00000154826.2	Nonsense mediated decay		A0A2R8VH29	-

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Summary

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