Gene: Cdo1 ENSMUSG00000033022

Description

cysteine dioxygenase 1, cytosolic [Source:MGI Symbol;Acc:MGI:105925]

Gene Synonyms

1300002L19Rik, Cdo, D18Ucla3

Location

Chromosome 18: 46,842,652-46,861,627 reverse strand.

GRCm39:CM001011.3

About this gene

This gene has 15 transcripts (splice variants), 204 orthologues and is associated with 32 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000035804.10	Cdo1-201	5365	200aa	ENSMUSP00000046517.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29234	P60334	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000467025.1	Cdo1-212	5341	192aa	ENSMUSP00000245388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000234819.3	Cdo1-205	5287	174aa	ENSMUSP00000157285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4L347	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000467020.1	Cdo1-207	5195	197aa	ENSMUSP00000245383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000569890.1	Cdo1-214	5040	103aa	ENSMUSP00000348253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000467022.1	Cdo1-209	4962	77aa	ENSMUSP00000245385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000234179.2	Cdo1-203	427	143aa	ENSMUSP00000157139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EGC3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000467019.1	Cdo1-206	1757	83aa	ENSMUSP00000245382.1	Nonsense mediated decay		-	-
ENSMUST00000569891.1	Cdo1-215	1597	83aa	ENSMUSP00000348254.1	Nonsense mediated decay		-	-
ENSMUST00000467024.1	Cdo1-211	1537	83aa	ENSMUSP00000245387.1	Nonsense mediated decay		-	-
ENSMUST00000467023.1	Cdo1-210	1503	88aa	ENSMUSP00000245386.1	Nonsense mediated decay		-	-
ENSMUST00000467021.1	Cdo1-208	1314	89aa	ENSMUSP00000245384.1	Nonsense mediated decay		-	-
ENSMUST00000550245.1	Cdo1-213	1089	115aa	ENSMUSP00000328608.1	Nonsense mediated decay		-	-
ENSMUST00000234064.2	Cdo1-202	857	149aa	ENSMUSP00000157361.2	Nonsense mediated decay		A0A3Q4EH84	-
ENSMUST00000234222.2	Cdo1-204	611	96aa	ENSMUSP00000157344.2	Nonsense mediated decay		A0A3Q4L374	-

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Gene: Cdo1 ENSMUSG00000033022

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Gene: Cdo1 ENSMUSG00000033022

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