Gene: Polr2f ENSMUSG00000033020

Description

polymerase (RNA) II (DNA directed) polypeptide F [Source:MGI Symbol;Acc:MGI:1349393]

Gene Synonyms

1810060D16Rik, RNA Pol II

Location

Chromosome 15: 79,025,209-79,035,974 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000230271.2	Polr2f-205	885	127aa	ENSMUSP00000155332.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27634	P61219	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000040077.8	Polr2f-201	452	112aa	ENSMUSP00000043566.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2U3TZ54	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229973.2	Polr2f-203	414	98aa	ENSMUSP00000155409.2	Nonsense mediated decay		A0A2R8VHS7	-
ENSMUST00000229978.2	Polr2f-204	1958	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000229762.2	Polr2f-202	509	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Polr2f ENSMUSG00000033020

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Gene: Polr2f ENSMUSG00000033020

Summary

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