Gene: Tmed3 ENSMUSG00000032353

Description

transmembrane p24 trafficking protein 3 [Source:MGI Symbol;Acc:MGI:1913361]

Gene Synonyms

1200002G13Rik

Location

Chromosome 9: 89,580,248-89,587,130 reverse strand.

GRCm39:CM001002.3

About this gene

This gene has 4 transcripts (splice variants), 177 orthologues, 10 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000058488.10	Tmed3-201	1354	221aa	ENSMUSP00000058723.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23396	Q78IS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000518322.1	Tmed3-204	1105	138aa	ENSMUSP00000296685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000518321.1	Tmed3-203	2561	63aa	ENSMUSP00000296684.1	Nonsense mediated decay		-	-
ENSMUST00000188808.2	Tmed3-202	1579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

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Gene: Tmed3 ENSMUSG00000032353

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Gene: Tmed3 ENSMUSG00000032353

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