Gene: Chrna7 ENSMUSG00000030525

Description

cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]

Gene Synonyms

Acra7, alpha7, alpha7 nicotinic receptor, alpha7-nAChR

Location

Chromosome 7: 62,731,494-62,862,322 reverse strand.

GRCm39:CM001000.3

About this gene

This gene has 6 transcripts (splice variants), 247 orthologues, 41 paralogues and is associated with 42 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000032738.8	Chrna7-201	5618	502aa	ENSMUSP00000032738.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21329	P49582 Q53YJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000512387.1	Chrna7-204	5573	487aa	ENSMUSP00000290750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000512389.1	Chrna7-206	5531	473aa	ENSMUSP00000290752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000512388.1	Chrna7-205	5494	333aa	ENSMUSP00000290751.1	Nonsense mediated decay		-	-
ENSMUST00000512386.1	Chrna7-203	3664	502aa	ENSMUSP00000290749.1	Nonsense mediated decay	CCDS21329	Q53YJ9	-
ENSMUST00000208304.2	Chrna7-202	2814	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Gene: Chrna7 ENSMUSG00000030525

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Gene: Chrna7 ENSMUSG00000030525

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