Gene: Cimip2c ENSMUSG00000029182

Description

ciliary microtubule inner protein 2C [Source:MGI Symbol;Acc:MGI:1922684]

Gene Synonyms

1700001C02Rik, Fam166c

Location

Chromosome 5: 30,623,391-30,641,432 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 4 transcripts (splice variants), 101 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000031078.10	Cimip2c-201	731	200aa	ENSMUSP00000031078.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19158	Q9DAS2-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000114743.2	Cimip2c-202	729	155aa	ENSMUSP00000110391.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3Z6F6	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000127815.2	Cimip2c-203	660	117aa	ENSMUSP00000142635.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9DAS2-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000199129.5	Cimip2c-204	697	116aa	ENSMUSP00000142583.2	Nonsense mediated decay		A0A0G2JE07	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Gene: Cimip2c ENSMUSG00000029182

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Gene: Cimip2c ENSMUSG00000029182

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