Advanced notice of Ensembl Tools maintenance
Please note that due to planned maintenance, Ensembl Tools will be unavailable from Tuesday, September 9, at 08:30 AM BST until Wednesday, September 10, at 08:30 AM BST.
Jobs submitted during the maintenance window will be queued and processed once maintenance is complete. We apologise for the inconvenience.

Mouse (GRCm39)
Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]

Gene Synonyms

SemB, Semab

Location

Chromosome 3: 88,343,266-88,368,489 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 19 transcripts (splice variants), 121 orthologues, 19 paralogues and is associated with 20 phenotypes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000029700.12Sema4a-2013205760aaENSMUSP00000029700.6
 
Protein coding
CCDS17475Q62178 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000165898.8Sema4a-2133125760aaENSMUSP00000128510.2
 
Protein coding
CCDS17475Q62178 GENCODE BasicAPPRIS P1TSL:5
ENSMUST00000169222.8Sema4a-2153084760aaENSMUSP00000128887.2
 
Protein coding
CCDS17475Q62178 GENCODE BasicAPPRIS P1TSL:5
ENSMUST00000166237.8Sema4a-2143046760aaENSMUSP00000125909.2
 
Protein coding
CCDS17475Q62178 GENCODE BasicAPPRIS P1TSL:1
ENSMUST00000107531.8Sema4a-2022897628aaENSMUSP00000103155.2
 
Protein coding
D3YWV5 GENCODE BasicTSL:5
ENSMUST00000127436.8Sema4a-205845233aaENSMUSP00000118706.2
 
Protein coding
D3YZ30 TSL:3CDS 3' incomplete
ENSMUST00000147200.8Sema4a-210706203aaENSMUSP00000123061.2
 
Protein coding
D3YUM4 TSL:5CDS 3' incomplete
ENSMUST00000141471.2Sema4a-20863060aaENSMUSP00000114330.2
 
Protein coding
D3YVM6 TSL:5CDS 3' incomplete
ENSMUST00000125526.8Sema4a-204506113aaENSMUSP00000119028.2
 
Protein coding
D3Z336 TSL:3CDS 3' incomplete
ENSMUST00000123753.8Sema4a-20338517aaENSMUSP00000120084.2
 
Protein coding
D3YWK5 TSL:2CDS 3' incomplete
ENSMUST00000184487.8Sema4a-216866170aaENSMUSP00000139126.2
 
Nonsense mediated decay
V9GXF5 TSL:5
ENSMUST00000184876.8Sema4a-217748180aaENSMUSP00000139159.2
 
Nonsense mediated decay
V9GXH9 TSL:5
ENSMUST00000185137.8Sema4a-21969947aaENSMUSP00000138858.2
 
Nonsense mediated decay
V9GWW2 TSL:3CDS 5' incomplete
ENSMUST00000146921.2Sema4a-209371No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000135539.8Sema4a-2062487No protein-
 
Retained intron
-TSL:2
ENSMUST00000149145.2Sema4a-2112357No protein-
 
Retained intron
-TSL:5
ENSMUST00000156108.8Sema4a-2122108No protein-
 
Retained intron
-TSL:2
ENSMUST00000135732.8Sema4a-207713No protein-
 
Retained intron
-TSL:3
ENSMUST00000184972.2Sema4a-218465No protein-
 
Retained intron
-TSL:2