Gene: Slc30a10 ENSMUSG00000026614

Description

solute carrier family 30, member 10 [Source:MGI Symbol;Acc:MGI:2685058]

Gene Synonyms

E130106K10Rik

Location

Chromosome 1: 185,186,973-185,200,959 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 6 transcripts (splice variants), 167 orthologues, 8 paralogues and is associated with 22 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000061093.8	Slc30a10-201	5908	470aa	ENSMUSP00000053181.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15599	Q3UVU3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000425175.1	Slc30a10-205	5668	390aa	ENSMUSP00000203538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000425176.1	Slc30a10-206	2103	238aa	ENSMUSP00000203539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000238677.2	Slc30a10-203	5684	215aa	ENSMUSP00000158739.2	Nonsense mediated decay		A0A571BG90	-
ENSMUST00000425174.1	Slc30a10-204	3553	215aa	ENSMUSP00000203537.1	Nonsense mediated decay		-	-
ENSMUST00000238198.2	Slc30a10-202	3506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Gene: Slc30a10 ENSMUSG00000026614

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Gene: Slc30a10 ENSMUSG00000026614

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