Gene: Adhfe1 ENSMUSG00000025911

Description

alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]

Gene Synonyms

6330565B14Rik

Location

Chromosome 1: 9,618,173-9,651,272 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 45 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000144177.8	Adhfe1-203	3239	465aa	ENSMUSP00000116627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14812	Q8R0N6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000517212.1	Adhfe1-214	3326	494aa	ENSMUSP00000295575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517225.1	Adhfe1-227	3236	464aa	ENSMUSP00000295588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000517233.1	Adhfe1-235	3230	462aa	ENSMUSP00000295596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000517240.1	Adhfe1-242	3230	462aa	ENSMUSP00000295603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000517213.1	Adhfe1-215	3203	453aa	ENSMUSP00000295576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517208.1	Adhfe1-210	3185	447aa	ENSMUSP00000295571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517216.1	Adhfe1-218	3161	439aa	ENSMUSP00000295579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517207.1	Adhfe1-209	3086	414aa	ENSMUSP00000295570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517239.1	Adhfe1-241	2714	290aa	ENSMUSP00000295602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517221.1	Adhfe1-223	2170	456aa	ENSMUSP00000295584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517241.1	Adhfe1-243	1253	363aa	ENSMUSP00000295604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000517222.1	Adhfe1-224	3891	38aa	ENSMUSP00000295585.1	Nonsense mediated decay		-	-
ENSMUST00000517238.1	Adhfe1-240	3655	39aa	ENSMUSP00000295601.1	Nonsense mediated decay		-	-
ENSMUST00000517205.1	Adhfe1-207	3048	35aa	ENSMUSP00000295568.1	Nonsense mediated decay		-	-
ENSMUST00000517206.1	Adhfe1-208	2918	38aa	ENSMUSP00000295569.1	Nonsense mediated decay		-	-
ENSMUST00000517204.1	Adhfe1-206	2462	465aa	ENSMUSP00000295567.1	Nonsense mediated decay	CCDS14812	-	-
ENSMUST00000517219.1	Adhfe1-221	2270	310aa	ENSMUSP00000295582.1	Nonsense mediated decay		-	-
ENSMUST00000517214.1	Adhfe1-216	2253	67aa	ENSMUSP00000295577.1	Nonsense mediated decay		-	-
ENSMUST00000517224.1	Adhfe1-226	2223	38aa	ENSMUSP00000295587.1	Nonsense mediated decay		-	-
ENSMUST00000517215.1	Adhfe1-217	2182	38aa	ENSMUSP00000295578.1	Nonsense mediated decay		-	-
ENSMUST00000517232.1	Adhfe1-234	2173	67aa	ENSMUSP00000295595.1	Nonsense mediated decay		-	-
ENSMUST00000517226.1	Adhfe1-228	2151	322aa	ENSMUSP00000295589.1	Nonsense mediated decay		-	-
ENSMUST00000517223.1	Adhfe1-225	2037	112aa	ENSMUSP00000295586.1	Nonsense mediated decay		-	-
ENSMUST00000517218.1	Adhfe1-220	2032	372aa	ENSMUSP00000295581.1	Nonsense mediated decay		-	-
ENSMUST00000027044.15	Adhfe1-201	2022	38aa	ENSMUSP00000137782.2	Nonsense mediated decay		M0QWD9	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000190654.2	Adhfe1-205	2021	457aa	ENSMUSP00000140592.2	Nonsense mediated decay		A0A087WRE7	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000517220.1	Adhfe1-222	2017	38aa	ENSMUSP00000295583.1	Nonsense mediated decay		-	-
ENSMUST00000517209.1	Adhfe1-211	2007	358aa	ENSMUSP00000295572.1	Nonsense mediated decay		-	-
ENSMUST00000517227.1	Adhfe1-229	1984	38aa	ENSMUSP00000295590.1	Nonsense mediated decay		-	-
ENSMUST00000517211.1	Adhfe1-213	1965	38aa	ENSMUSP00000295574.1	Nonsense mediated decay		-	-
ENSMUST00000517230.1	Adhfe1-232	1869	351aa	ENSMUSP00000295593.1	Nonsense mediated decay		-	-
ENSMUST00000517235.1	Adhfe1-237	1855	38aa	ENSMUSP00000295598.1	Nonsense mediated decay		-	-
ENSMUST00000517228.1	Adhfe1-230	1854	38aa	ENSMUSP00000295591.1	Nonsense mediated decay		-	-
ENSMUST00000563444.1	Adhfe1-244	1851	38aa	ENSMUSP00000341807.1	Nonsense mediated decay		-	-
ENSMUST00000517217.1	Adhfe1-219	1837	35aa	ENSMUSP00000295580.1	Nonsense mediated decay		-	-
ENSMUST00000517231.1	Adhfe1-233	1834	51aa	ENSMUSP00000295594.1	Nonsense mediated decay		-	-
ENSMUST00000517229.1	Adhfe1-231	1799	88aa	ENSMUSP00000295592.1	Nonsense mediated decay		-	-
ENSMUST00000517237.1	Adhfe1-239	1732	69aa	ENSMUSP00000295600.1	Nonsense mediated decay		-	-
ENSMUST00000517210.1	Adhfe1-212	1694	38aa	ENSMUSP00000295573.1	Nonsense mediated decay		-	-
ENSMUST00000517234.1	Adhfe1-236	1630	38aa	ENSMUSP00000295597.1	Nonsense mediated decay		-	-
ENSMUST00000563445.1	Adhfe1-245	1630	35aa	ENSMUSP00000341808.1	Nonsense mediated decay		-	-
ENSMUST00000517236.1	Adhfe1-238	1449	39aa	ENSMUSP00000295599.1	Nonsense mediated decay		-	-
ENSMUST00000186467.2	Adhfe1-204	466	39aa	ENSMUSP00000140861.2	Nonsense mediated decay		A0A087WS19	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000130927.8	Adhfe1-202	459	67aa	ENSMUSP00000137817.2	Nonsense mediated decay		M0QWG3	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Upcoming Ensembl Platform Transition

Gene: Adhfe1 ENSMUSG00000025911

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Gene: Adhfe1 ENSMUSG00000025911

Summary

About Us

Get help

Our sister sites

Follow us