Gene: Rbp4 ENSMUSG00000024990

Description

retinol binding protein 4, plasma [Source:MGI Symbol;Acc:MGI:97879]

Gene Synonyms

Rbp-4, retinol binding protein 4, cellular

Location

Chromosome 19: 38,105,077-38,113,729 reverse strand.

GRCm39:CM001012.3

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and is associated with 33 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000112335.4	Rbp4-202	937	201aa	ENSMUSP00000107954.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29784	Q00724	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000025951.14	Rbp4-201	1161	245aa	ENSMUSP00000025951.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50430	H7BWY6	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237287.2	Rbp4-204	581	122aa	ENSMUSP00000157796.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9T2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000236283.2	Rbp4-203	410	104aa	ENSMUSP00000157743.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9P3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: Rbp4 ENSMUSG00000024990

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Gene: Rbp4 ENSMUSG00000024990

Summary

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