Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Mal2 ENSMUSG00000024479

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Description

mal, T cell differentiation protein 2 [Source:MGI Symbol;Acc:MGI:2146021]

Location

Chromosome 15: 54,434,576-54,466,243 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 10 transcripts (splice variants), 199 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025356.5	Mal2-201	2962	175aa	ENSMUSP00000025356.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27470	Q2KHK7 Q8BI08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000481126.1	Mal2-209	2977	188aa	ENSMUSP00000259489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000481119.1	Mal2-202	2784	118aa	ENSMUSP00000259482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000481121.1	Mal2-204	3214	48aa	ENSMUSP00000259484.1	Nonsense mediated decay		-	-
ENSMUST00000481127.1	Mal2-210	3206	48aa	ENSMUSP00000259490.1	Nonsense mediated decay		-	-
ENSMUST00000481123.1	Mal2-206	3088	48aa	ENSMUSP00000259486.1	Nonsense mediated decay		-	-
ENSMUST00000481120.1	Mal2-203	2892	85aa	ENSMUSP00000259483.1	Nonsense mediated decay		-	-
ENSMUST00000481125.1	Mal2-208	2888	44aa	ENSMUSP00000259488.1	Nonsense mediated decay		-	-
ENSMUST00000481124.1	Mal2-207	2827	181aa	ENSMUSP00000259487.1	Nonsense mediated decay		-	-
ENSMUST00000481122.1	Mal2-205	2734	48aa	ENSMUSP00000259485.1	Nonsense mediated decay		-	-

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Summary

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