Gene: Pim1 ENSMUSG00000024014

Description

proviral integration site 1 [Source:MGI Symbol;Acc:MGI:97584]

Gene Synonyms

Pim-1

Location

Chromosome 17: 29,709,727-29,715,086 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 7 transcripts (splice variants), 241 orthologues, 2 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024811.9	Pim1-201	2698	313aa	ENSMUSP00000024811.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS79520	P06803-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234665.2	Pim1-207	1794	79aa	ENSMUSP00000157217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EGX3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000234270.2	Pim1-203	867	79aa	ENSMUSP00000156987.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EGX3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000234650.2	Pim1-206	586	195aa	ENSMUSP00000157125.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EGB5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000234478.2	Pim1-205	1204	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000234263.2	Pim1-202	355	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000234294.2	Pim1-204	1578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Pim1 ENSMUSG00000024014

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Gene: Pim1 ENSMUSG00000024014

Summary

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