Gene: Aars2 ENSMUSG00000023938

Description

alanyl-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:2681839]

Gene Synonyms

Aarsl

Location

Chromosome 17: 45,817,749-45,832,900 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 41 transcripts (splice variants), 195 orthologues, 2 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024733.10	Aars2-201	4494	980aa	ENSMUSP00000024733.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28809	Q14CH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000524387.1	Aars2-236	4542	996aa	ENSMUSP00000302750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000524373.1	Aars2-222	4521	989aa	ENSMUSP00000302736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000524365.1	Aars2-214	4506	984aa	ENSMUSP00000302728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSMUST00000524368.1	Aars2-217	4491	979aa	ENSMUSP00000302731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSMUST00000524369.1	Aars2-218	4443	963aa	ENSMUSP00000302732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000524359.1	Aars2-208	4383	943aa	ENSMUSP00000302722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000524356.1	Aars2-205	4711	351aa	ENSMUSP00000302719.1	Nonsense mediated decay		-	-
ENSMUST00000524358.1	Aars2-207	4710	351aa	ENSMUSP00000302721.1	Nonsense mediated decay		-	-
ENSMUST00000524364.1	Aars2-213	4555	295aa	ENSMUSP00000302727.1	Nonsense mediated decay		-	-
ENSMUST00000524366.1	Aars2-215	4542	295aa	ENSMUSP00000302729.1	Nonsense mediated decay		-	-
ENSMUST00000524361.1	Aars2-210	4492	627aa	ENSMUSP00000302724.1	Nonsense mediated decay		-	-
ENSMUST00000524357.1	Aars2-206	4489	216aa	ENSMUSP00000302720.1	Nonsense mediated decay		-	-
ENSMUST00000524360.1	Aars2-209	4486	307aa	ENSMUSP00000302723.1	Nonsense mediated decay		-	-
ENSMUST00000524362.1	Aars2-211	4481	307aa	ENSMUSP00000302725.1	Nonsense mediated decay		-	-
ENSMUST00000524363.1	Aars2-212	4481	525aa	ENSMUSP00000302726.1	Nonsense mediated decay		-	-
ENSMUST00000524389.1	Aars2-238	3683	492aa	ENSMUSP00000302752.1	Nonsense mediated decay		-	-
ENSMUST00000524381.1	Aars2-230	3677	351aa	ENSMUSP00000302744.1	Nonsense mediated decay		-	-
ENSMUST00000524379.1	Aars2-228	3641	284aa	ENSMUSP00000302742.1	Nonsense mediated decay		-	-
ENSMUST00000524371.1	Aars2-220	3568	351aa	ENSMUSP00000302734.1	Nonsense mediated decay		-	-
ENSMUST00000524382.1	Aars2-231	3565	351aa	ENSMUSP00000302745.1	Nonsense mediated decay		-	-
ENSMUST00000524392.1	Aars2-241	3542	391aa	ENSMUSP00000302755.1	Nonsense mediated decay		-	-
ENSMUST00000524388.1	Aars2-237	3510	351aa	ENSMUSP00000302751.1	Nonsense mediated decay		-	-
ENSMUST00000524378.1	Aars2-227	3498	318aa	ENSMUSP00000302741.1	Nonsense mediated decay		-	-
ENSMUST00000524367.1	Aars2-216	3474	351aa	ENSMUSP00000302730.1	Nonsense mediated decay		-	-
ENSMUST00000524370.1	Aars2-219	3462	351aa	ENSMUSP00000302733.1	Nonsense mediated decay		-	-
ENSMUST00000524384.1	Aars2-233	3459	351aa	ENSMUSP00000302747.1	Nonsense mediated decay		-	-
ENSMUST00000524386.1	Aars2-235	3390	351aa	ENSMUSP00000302749.1	Nonsense mediated decay		-	-
ENSMUST00000524380.1	Aars2-229	3382	351aa	ENSMUSP00000302743.1	Nonsense mediated decay		-	-
ENSMUST00000524372.1	Aars2-221	3355	448aa	ENSMUSP00000302735.1	Nonsense mediated decay		-	-
ENSMUST00000524385.1	Aars2-234	3349	340aa	ENSMUSP00000302748.1	Nonsense mediated decay		-	-
ENSMUST00000524377.1	Aars2-226	3347	340aa	ENSMUSP00000302740.1	Nonsense mediated decay		-	-
ENSMUST00000524383.1	Aars2-232	3344	828aa	ENSMUSP00000302746.1	Nonsense mediated decay		-	-
ENSMUST00000524391.1	Aars2-240	3322	351aa	ENSMUSP00000302754.1	Nonsense mediated decay		-	-
ENSMUST00000524390.1	Aars2-239	3270	351aa	ENSMUSP00000302753.1	Nonsense mediated decay		-	-
ENSMUST00000524374.1	Aars2-223	3248	779aa	ENSMUSP00000302737.1	Nonsense mediated decay		-	-
ENSMUST00000524375.1	Aars2-224	3219	336aa	ENSMUSP00000302738.1	Nonsense mediated decay		-	-
ENSMUST00000524376.1	Aars2-225	3210	336aa	ENSMUSP00000302739.1	Nonsense mediated decay		-	-
ENSMUST00000232693.2	Aars2-202	2956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000233523.2	Aars2-204	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000233391.2	Aars2-203	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Gene: Aars2 ENSMUSG00000023938

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Gene: Aars2 ENSMUSG00000023938

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