Gene: Asic1 ENSMUSG00000023017

Description

acid-sensing (proton-gated) ion channel 1 [Source:MGI Symbol;Acc:MGI:1194915]

Gene Synonyms

ASIC, ASIC1 beta, ASIC1a, ASIC1b, ASICalpha, Accn2, B530003N02Rik, BNaC2

Location

Chromosome 15: 99,568,249-99,599,011 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 6 transcripts (splice variants), 225 orthologues, 7 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000228185.2	Asic1-205	1818	559aa	ENSMUSP00000154379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NXK8-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000023758.9	Asic1-201	4114	526aa	ENSMUSP00000023758.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27826	Q6NXK8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227670.2	Asic1-203	2788	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000228610.2	Asic1-206	929	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000226291.2	Asic1-202	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000228012.2	Asic1-204	638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Asic1 ENSMUSG00000023017

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Gene: Asic1 ENSMUSG00000023017

Summary

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