Gene: Tmem45a ENSMUSG00000022754

Description

transmembrane protein 45a [Source:MGI Symbol;Acc:MGI:1913122]

Gene Synonyms

C630002M10Rik

Location

Chromosome 16: 56,625,524-56,706,529 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues, 6 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023435.6	Tmem45a-201	2701	273aa	ENSMUSP00000023435.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28226	Q8BFU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000232373.2	Tmem45a-204	471	131aa	ENSMUSP00000155931.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P6Q2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000135672.2	Tmem45a-202	327	47aa	ENSMUSP00000116978.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9C432	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000148452.3	Tmem45a-203	484	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Gene: Tmem45a ENSMUSG00000022754

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Tmem45a ENSMUSG00000022754

Summary

About Us

Get help

Our sister sites

Follow us