Gene: Grina ENSMUSG00000022564

Description

glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) [Source:MGI Symbol;Acc:MGI:1913418]

Gene Synonyms

1110025J15Rik, Tmbim3

Location

Chromosome 15: 76,130,964-76,134,104 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 5 transcripts (splice variants), 261 orthologues, 6 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023225.8	Grina-201	1725	345aa	ENSMUSP00000023225.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27563	Q9ESF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230347.2	Grina-205	616	121aa	ENSMUSP00000155539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHX7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000229772.2	Grina-203	444	79aa	ENSMUSP00000154982.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHD1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000229380.2	Grina-202	373	23aa	ENSMUSP00000155771.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VI53	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000229916.2	Grina-204	854	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Grina ENSMUSG00000022564

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Gene: Grina ENSMUSG00000022564

Summary

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