Gene: Ddx46 ENSMUSG00000021500

Description

DEAD box helicase 46 [Source:MGI Symbol;Acc:MGI:1920895]

Gene Synonyms

2200005K02Rik, 8430438J23Rik, DEAD (Asp-Glu-Ala-Asp) box polypeptide 46

Location

Chromosome 13: 55,782,841-55,829,069 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues, 40 paralogues and is associated with 21 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000223736.2	Ddx46-201	5612	1032aa	ENSMUSP00000153328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS70464	Q569Z5-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000231097.2	Ddx46-203	432	144aa	ENSMUSP00000155176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHK2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000224551.2	Ddx46-202	4056	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Gene: Ddx46 ENSMUSG00000021500

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Gene: Ddx46 ENSMUSG00000021500

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