Gene: Degs2 ENSMUSG00000021263

Description

delta 4-desaturase, sphingolipid 2 [Source:MGI Symbol;Acc:MGI:1917309]

Gene Synonyms

2210008A03Rik, Des2

Location

Chromosome 12: 108,644,970-108,668,570 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 3 transcripts (splice variants), 194 orthologues, 2 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000021691.6	Degs2-201	1287	323aa	ENSMUSP00000021691.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26162	Q8R2F2-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000167978.9	Degs2-202	1729	286aa	ENSMUSP00000125891.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49170	Q8R2F2-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000222255.2	Degs2-203	737	98aa	ENSMUSP00000152122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1Y7VIS8	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Gene: Degs2 ENSMUSG00000021263

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Gene: Degs2 ENSMUSG00000021263

Summary

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