Gene: Adat2 ENSMUSG00000019808

Description

adenosine deaminase, tRNA-specific 2 [Source:MGI Symbol;Acc:MGI:1914007]

Gene Synonyms

4933426M09Rik, Deadc1

Location

Chromosome 10: 13,428,638-13,439,261 forward strand.

GRCm39:CM001003.3

About this gene

This gene has 7 transcripts (splice variants), 196 orthologues, 2 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000019944.9	Adat2-201	1466	191aa	ENSMUSP00000019944.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35847	Q6P6J0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000562460.1	Adat2-204	1393	174aa	ENSMUSP00000340823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000562459.1	Adat2-203	1361	156aa	ENSMUSP00000340822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000562463.1	Adat2-207	1167	199aa	ENSMUSP00000340826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000514003.1	Adat2-202	2274	131aa	ENSMUSP00000292366.1	Nonsense mediated decay		-	-
ENSMUST00000562461.1	Adat2-205	997	44aa	ENSMUSP00000340824.1	Nonsense mediated decay		-	-
ENSMUST00000562462.1	Adat2-206	992	44aa	ENSMUSP00000340825.1	Nonsense mediated decay		-	-

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Gene: Adat2 ENSMUSG00000019808

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Gene: Adat2 ENSMUSG00000019808

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