Gene: Crhr1 ENSMUSG00000018634

Description

corticotropin releasing hormone receptor 1 [Source:MGI Symbol;Acc:MGI:88498]

Gene Synonyms

CRF 1 receptor, CRF-R1alpha, CRF1R, CRFR1

Location

Chromosome 11: 104,023,164-104,066,351 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 11 transcripts (splice variants), 240 orthologues, 41 paralogues and is associated with 21 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000093925.6	Crhr1-201	2979	415aa	ENSMUSP00000091455.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25526	P35347 Q3ZAT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000420824.1	Crhr1-202	2976	414aa	ENSMUSP00000199187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000420825.1	Crhr1-203	2842	320aa	ENSMUSP00000199188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000420831.1	Crhr1-209	2950	311aa	ENSMUSP00000199194.1	Nonsense mediated decay		-	-
ENSMUST00000420832.1	Crhr1-210	2889	148aa	ENSMUSP00000199195.1	Nonsense mediated decay		-	-
ENSMUST00000420833.1	Crhr1-211	2532	121aa	ENSMUSP00000199196.1	Nonsense mediated decay		-	-
ENSMUST00000420830.1	Crhr1-208	2499	311aa	ENSMUSP00000199193.1	Nonsense mediated decay		-	-
ENSMUST00000420827.1	Crhr1-205	2460	255aa	ENSMUSP00000199190.1	Nonsense mediated decay		-	-
ENSMUST00000420829.1	Crhr1-207	2445	255aa	ENSMUSP00000199192.1	Nonsense mediated decay		-	-
ENSMUST00000420828.1	Crhr1-206	2434	179aa	ENSMUSP00000199191.1	Nonsense mediated decay		-	-
ENSMUST00000420826.1	Crhr1-204	2330	255aa	ENSMUSP00000199189.1	Nonsense mediated decay		-	-

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Gene: Crhr1 ENSMUSG00000018634

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Gene: Crhr1 ENSMUSG00000018634

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