Gene: Snapc2 ENSMUSG00000011837

Description

small nuclear RNA activating complex, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1914861]

Gene Synonyms

0610007H10Rik

Location

Chromosome 8: 4,303,080-4,306,220 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 4 transcripts (splice variants), 169 orthologues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000011981.5	Snapc2-201	1536	359aa	ENSMUSP00000011981.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22081	Q91XA5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000208316.2	Snapc2-203	1190	249aa	ENSMUSP00000146771.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140LID1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000208459.2	Snapc2-204	956	222aa	ENSMUSP00000146560.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140LHV3	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000208110.2	Snapc2-202	428	55aa	ENSMUSP00000146378.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140LHE1	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Gene: Snapc2 ENSMUSG00000011837

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Gene: Snapc2 ENSMUSG00000011837

Summary

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