Gene: Ifi35 ENSMUSG00000010358

Description

interferon-induced protein 35 [Source:MGI Symbol;Acc:MGI:1917360]

Gene Synonyms

2010008K16Rik, IFP35

Location

Chromosome 11: 101,339,221-101,352,693 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 19 transcripts (splice variants), 196 orthologues, 2 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000010502.13	Ifi35-201	1362	286aa	ENSMUSP00000010502.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25471	Q9D8C4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000453959.1	Ifi35-204	2558	306aa	ENSMUSP00000232322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000453962.1	Ifi35-207	1601	54aa	ENSMUSP00000232325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000453968.1	Ifi35-213	1150	294aa	ENSMUSP00000232331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000453966.1	Ifi35-211	1619	44aa	ENSMUSP00000232329.1	Nonsense mediated decay		-	-
ENSMUST00000453963.1	Ifi35-208	1465	54aa	ENSMUSP00000232326.1	Nonsense mediated decay		-	-
ENSMUST00000553692.1	Ifi35-215	1432	145aa	ENSMUSP00000332055.1	Nonsense mediated decay		-	-
ENSMUST00000569838.1	Ifi35-216	1421	90aa	ENSMUSP00000348201.1	Nonsense mediated decay		-	-
ENSMUST00000453969.1	Ifi35-214	1380	67aa	ENSMUSP00000232332.1	Nonsense mediated decay		-	-
ENSMUST00000453961.1	Ifi35-206	1369	93aa	ENSMUSP00000232324.1	Nonsense mediated decay		-	-
ENSMUST00000453960.1	Ifi35-205	1367	54aa	ENSMUSP00000232323.1	Nonsense mediated decay		-	-
ENSMUST00000453965.1	Ifi35-210	1344	44aa	ENSMUSP00000232328.1	Nonsense mediated decay		-	-
ENSMUST00000453967.1	Ifi35-212	1307	67aa	ENSMUSP00000232330.1	Nonsense mediated decay		-	-
ENSMUST00000569841.1	Ifi35-219	1276	93aa	ENSMUSP00000348204.1	Nonsense mediated decay		-	-
ENSMUST00000569839.1	Ifi35-217	1188	90aa	ENSMUSP00000348202.1	Nonsense mediated decay		-	-
ENSMUST00000569840.1	Ifi35-218	1110	67aa	ENSMUSP00000348203.1	Nonsense mediated decay		-	-
ENSMUST00000131024.2	Ifi35-203	1020	54aa	ENSMUSP00000117189.2	Nonsense mediated decay		D6RFB1	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000453964.1	Ifi35-209	988	54aa	ENSMUSP00000232327.1	Nonsense mediated decay		-	-
ENSMUST00000125958.2	Ifi35-202	1117	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Upcoming Ensembl Platform Transition

Gene: Ifi35 ENSMUSG00000010358

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Gene: Ifi35 ENSMUSG00000010358

Summary

About Us

Get help

Our sister sites

Follow us