Gene: Rnf114 ENSMUSG00000006418

Description

ring finger protein 114 [Source:MGI Symbol;Acc:MGI:1933159]

Gene Synonyms

1110008J21Rik, Zfp313, Znf228

Location

Chromosome 2: 167,334,565-167,358,093 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 37 transcripts (splice variants), 199 orthologues, 5 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000078050.8	Rnf114-201	2548	229aa	ENSMUSP00000077197.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17101	Q9ET26	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000109214.9	Rnf114-202	3008	229aa	ENSMUSP00000104837.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17101	Q9ET26	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000398305.1	Rnf114-222	2552	213aa	ENSMUSP00000176668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398300.1	Rnf114-217	2545	228aa	ENSMUSP00000176663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000398309.1	Rnf114-226	2545	228aa	ENSMUSP00000176672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398301.1	Rnf114-218	2499	200aa	ENSMUSP00000176664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398303.1	Rnf114-220	2440	193aa	ENSMUSP00000176666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398304.1	Rnf114-221	2290	143aa	ENSMUSP00000176667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000582697.1	Rnf114-237	2218	119aa	ENSMUSP00000361062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398287.1	Rnf114-204	2175	92aa	ENSMUSP00000176650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398313.1	Rnf114-230	2067	56aa	ENSMUSP00000176676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398297.1	Rnf114-214	2018	178aa	ENSMUSP00000176660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398302.1	Rnf114-219	2003	173aa	ENSMUSP00000176665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000398307.1	Rnf114-224	4042	57aa	ENSMUSP00000176670.1	Nonsense mediated decay		-	-
ENSMUST00000398316.1	Rnf114-233	3729	113aa	ENSMUSP00000176679.1	Nonsense mediated decay		-	-
ENSMUST00000548414.1	Rnf114-236	3213	48aa	ENSMUSP00000326777.1	Nonsense mediated decay		-	-
ENSMUST00000398308.1	Rnf114-225	3188	57aa	ENSMUSP00000176671.1	Nonsense mediated decay		-	-
ENSMUST00000398317.1	Rnf114-234	3182	48aa	ENSMUSP00000176680.1	Nonsense mediated decay		-	-
ENSMUST00000398293.1	Rnf114-210	2889	48aa	ENSMUSP00000176656.1	Nonsense mediated decay		-	-
ENSMUST00000398290.1	Rnf114-207	2763	48aa	ENSMUSP00000176653.1	Nonsense mediated decay		-	-
ENSMUST00000398296.1	Rnf114-213	2567	48aa	ENSMUSP00000176659.1	Nonsense mediated decay		-	-
ENSMUST00000398288.1	Rnf114-205	2542	48aa	ENSMUSP00000176651.1	Nonsense mediated decay		-	-
ENSMUST00000548413.1	Rnf114-235	2406	151aa	ENSMUSP00000326776.1	Nonsense mediated decay		-	-
ENSMUST00000398294.1	Rnf114-211	2301	99aa	ENSMUSP00000176657.1	Nonsense mediated decay		-	-
ENSMUST00000398295.1	Rnf114-212	2247	57aa	ENSMUSP00000176658.1	Nonsense mediated decay		-	-
ENSMUST00000398298.1	Rnf114-215	2192	65aa	ENSMUSP00000176661.1	Nonsense mediated decay		-	-
ENSMUST00000398310.1	Rnf114-227	2176	48aa	ENSMUSP00000176673.1	Nonsense mediated decay		-	-
ENSMUST00000398292.1	Rnf114-209	2169	50aa	ENSMUSP00000176655.1	Nonsense mediated decay		-	-
ENSMUST00000398299.1	Rnf114-216	2160	99aa	ENSMUSP00000176662.1	Nonsense mediated decay		-	-
ENSMUST00000398312.1	Rnf114-229	2152	95aa	ENSMUSP00000176675.1	Nonsense mediated decay		-	-
ENSMUST00000398311.1	Rnf114-228	2137	90aa	ENSMUSP00000176674.1	Nonsense mediated decay		-	-
ENSMUST00000398289.1	Rnf114-206	2057	57aa	ENSMUSP00000176652.1	Nonsense mediated decay		-	-
ENSMUST00000398291.1	Rnf114-208	2044	57aa	ENSMUSP00000176654.1	Nonsense mediated decay		-	-
ENSMUST00000398314.1	Rnf114-231	2014	48aa	ENSMUSP00000176677.1	Nonsense mediated decay		-	-
ENSMUST00000127939.2	Rnf114-203	1985	57aa	ENSMUSP00000138430.2	Nonsense mediated decay		S4R1Z0	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000398315.1	Rnf114-232	1973	52aa	ENSMUSP00000176678.1	Nonsense mediated decay		-	-
ENSMUST00000398306.1	Rnf114-223	1951	57aa	ENSMUSP00000176669.1	Nonsense mediated decay		-	-

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Gene: Rnf114 ENSMUSG00000006418

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Gene: Rnf114 ENSMUSG00000006418

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