Gene: Ebi3 ENSMUSG00000003206

Description

Epstein-Barr virus induced gene 3 [Source:MGI Symbol;Acc:MGI:1354171]

Gene Synonyms

EBI-3, IL-27

Location

Chromosome 17: 56,259,270-56,264,023 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 5 transcripts (splice variants), 189 orthologues, 24 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000003274.9	Ebi3-201	1155	228aa	ENSMUSP00000003274.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28888	O35228 Q3U1K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000569635.1	Ebi3-203	1115	228aa	ENSMUSP00000347998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28888	Q3U1K3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000584943.1	Ebi3-205	1000	129aa	ENSMUSP00000363308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000502510.1	Ebi3-202	1988	131aa	ENSMUSP00000280873.1	Nonsense mediated decay		-	-
ENSMUST00000575956.1	Ebi3-204	1023	59aa	ENSMUSP00000354319.1	Nonsense mediated decay		-	-

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Gene: Ebi3 ENSMUSG00000003206

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Gene: Ebi3 ENSMUSG00000003206

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