Gene: Rpl3l ENSMUSG00000002500

Description

ribosomal protein L3-like [Source:MGI Symbol;Acc:MGI:1913461]

Gene Synonyms

1110057H16Rik

Location

Chromosome 17: 24,946,794-24,955,117 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues, 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000170239.9	Rpl3l-202	1375	407aa	ENSMUSP00000129325.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50019	E9PWZ3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000045186.11	Rpl3l-201	1033	240aa	ENSMUSP00000038326.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37494	E9PWZ3-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000183214.2	Rpl3l-203	599	133aa	ENSMUSP00000138489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R242	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: Rpl3l ENSMUSG00000002500

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Gene: Rpl3l ENSMUSG00000002500

Summary

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