Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SDC1 ENSMMUG00000030922

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Description

syndecan 1 [Source:VGNC Symbol;Acc:VGNC:76997]

Location

Primary_assembly 13: 88,784,233-88,808,654 forward strand.

Mmul_10:CM014348.1

About this gene

This gene has 3 transcripts (splice variants), 134 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMMUT00000107391.1	SDC1-202	1518	505aa	ENSMMUP00000063420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F7ZE20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMMUT00000043737.3	SDC1-201	1918	310aa	ENSMMUP00000036726.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I0FGI3	-
ENSMMUT00000062828.2	SDC1-203	876	291aa	ENSMMUP00000060272.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5RIX8	-

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Summary

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