Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS54 ENSMMUG00000008772

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Description

VPS54 subunit of GARP complex [Source:VGNC Symbol;Acc:VGNC:79159]

Location

Primary_assembly 13: 44,760,797-45,039,005 forward strand.

Mmul_10:CM014348.1

About this gene

This gene has 7 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMMUT00000043526.3	VPS54-207	2922	973aa	ENSMMUP00000036527.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A4V8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMMUT00000109053.1	VPS54-205	7022	965aa	ENSMMUP00000064395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DKK9	-
ENSMMUT00000105495.1	VPS54-201	3500	965aa	ENSMMUP00000069070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DKK9	-
ENSMMUT00000107162.1	VPS54-203	2936	925aa	ENSMMUP00000064783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F7ZGM8	-
ENSMMUT00000012254.4	VPS54-206	2918	965aa	ENSMMUP00000011493.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DKK9	-
ENSMMUT00000043525.3	VPS54-204	2846	941aa	ENSMMUP00000036526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A4W8	-
ENSMMUT00000081732.1	VPS54-202	2822	933aa	ENSMMUP00000071921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F8A4S1	-

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Summary

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