Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CIITA ENSMMUG00000007777

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Description

class II major histocompatibility complex transactivator [Source:VGNC Symbol;Acc:VGNC:71385]

Location

Primary_assembly 20: 10,827,529-10,890,407 forward strand.

Mmul_10:CM014355.1

About this gene

This gene has 9 transcripts (splice variants), 141 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMMUT00000084454.1	CIITA-201	5660	1207aa	ENSMMUP00000073242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F8A5T1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMMUT00000091622.1	CIITA-205	5936	1130aa	ENSMMUP00000067219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F7ZNK3	-
ENSMMUT00000058326.2	CIITA-204	5532	1127aa	ENSMMUP00000059089.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5RFJ5	-
ENSMMUT00000088761.1	CIITA-209	5216	1057aa	ENSMMUP00000069427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F7ZXQ8	-
ENSMMUT00000039569.3	CIITA-202	3490	1155aa	ENSMMUP00000032639.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6S719	-
ENSMMUT00000039567.3	CIITA-203	3487	1154aa	ENSMMUP00000032637.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6S737	-
ENSMMUT00000039568.3	CIITA-206	3337	1104aa	ENSMMUP00000032638.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6S727	-
ENSMMUT00000010893.4	CIITA-207	3325	1100aa	ENSMMUP00000010220.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7CVK8	-
ENSMMUT00000067056.2	CIITA-208	3274	1083aa	ENSMMUP00000058415.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5RDM2	-

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Summary

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