Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS39 ENSMICG00000000780

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Description

VPS39 subunit of HOPS complex [Source:HGNC Symbol;Acc:HGNC:20593]

Location

Chromosome 3: 93,941,801-93,988,926 reverse strand.

Mmur_3.0:CM007663.1

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMICT00000047853.2	VPS39-202	2685	894aa	ENSMICP00000016605.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5V6G2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMICT00000036977.2	VPS39-201	5518	751aa	ENSMICP00000024755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5VR84	-
ENSMICT00000000782.3	VPS39-203	2658	885aa	ENSMICP00000000703.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5UKW3	-

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Summary

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