Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXA1 ENSLAFG00000001615

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Description

homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]

Location

SuperContig scaffold_5: 31,373,619-31,375,096 forward strand.

loxAfr3:GL010032.1

About this gene

This gene has 2 transcripts (splice variants), 200 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSLAFT00000027194.1	HOXA1-201	999	333aa	ENSLAFP00000023653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3U745	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSLAFT00000001615.2	HOXA1-202	966	321aa	ENSLAFP00000001348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3SNW5	-

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Summary

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