Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: runx1 ENSHCOG00000004312

.

Description

RUNX family transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-000605-1]

Location

Primary_assembly KV880338.1: 3,553,218-3,566,626 forward strand.

About this gene

This gene has 8 transcripts (splice variants), 205 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSHCOT00000010813.1	runx1-202	1482	493aa	ENSHCOP00000002203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2XDL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSHCOT00000010885.1	runx1-203	1467	488aa	ENSHCOP00000002158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2XDH4	-
ENSHCOT00000010894.1	runx1-204	1401	466aa	ENSHCOP00000002150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2XCV3	-
ENSHCOT00000010967.1	runx1-205	1347	448aa	ENSHCOP00000018559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2YJM2	-
ENSHCOT00000011005.1	runx1-206	1344	447aa	ENSHCOP00000002085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2XCN9	-
ENSHCOT00000011062.1	runx1-207	1218	405aa	ENSHCOP00000002050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2XCK7	-
ENSHCOT00000011090.1	runx1-208	1206	401aa	ENSHCOP00000018512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2YXX6	-
ENSHCOT00000010229.1	runx1-201	573	190aa	ENSHCOP00000002551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2XR08	-

.

Summary

.

.