Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: prpf40a ENSGMOG00000019237

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Description

PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]

Location

Primary_assembly 20: 4,463,078-4,482,311 reverse strand.

gadMor3.0:LR633962.1

About this gene

This gene has 9 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGMOT00000073999.1	prpf40a-201	2706	885aa	ENSGMOP00000041209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5B4C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGMOT00000021210.2	prpf40a-202	2682	877aa	ENSGMOP00000020704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C4ZS28	-
ENSGMOT00000046452.1	prpf40a-203	2421	790aa	ENSGMOP00000028481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5AA42	-
ENSGMOT00000048658.1	prpf40a-208	2214	737aa	ENSGMOP00000067221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5FWR1	-
ENSGMOT00000054607.1	prpf40a-209	2208	735aa	ENSGMOP00000053474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5C038	-
ENSGMOT00000031496.1	prpf40a-207	2148	715aa	ENSGMOP00000038506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5AWT6	-
ENSGMOT00000029958.1	prpf40a-204	2013	670aa	ENSGMOP00000041170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5B5I6	-
ENSGMOT00000074587.1	prpf40a-205	1992	663aa	ENSGMOP00000030550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5ADF6	-
ENSGMOT00000060800.1	prpf40a-206	1977	658aa	ENSGMOP00000069374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5D3U7	-

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Summary

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