Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rfx1a ENSGMOG00000008963

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Description

regulatory factor X, 1a (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-070424-94]

Location

Primary_assembly 2: 13,556,823-13,581,365 forward strand.

gadMor3.0:LR633944.1

About this gene

This gene has 5 transcripts (splice variants), 190 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGMOT00000059690.1	rfx1a-202	5199	922aa	ENSGMOP00000069253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5CYV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGMOT00000032430.1	rfx1a-203	3169	728aa	ENSGMOP00000027282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5A5M9	-
ENSGMOT00000050813.1	rfx1a-204	2965	660aa	ENSGMOP00000045832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5BG68	-
ENSGMOT00000009850.2	rfx1a-201	2703	865aa	ENSGMOP00000009591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C4Z8N7	-
ENSGMOT00000029363.1	rfx1a-205	2019	621aa	ENSGMOP00000048900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C5BU06	-

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Summary

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