Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL9A1 ENSGGOG00000010221

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Description

collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]

Location

Chromosome 6: 72,117,081-72,215,308 reverse strand.

gorGor4:FR853099.2

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGGOT00000010284.3	COL9A1-201	3704	921aa	ENSGGOP00000009995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3R409	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGGOT00000065690.1	COL9A1-202	2973	678aa	ENSGGOP00000041028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I2Z1A1	-
ENSGGOT00000057577.1	COL9A1-203	987	328aa	ENSGGOP00000032231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I2YBE7	-

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Summary

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